Pull request #395: Feature/TADMIN-1527 update simplified phi report using agreed criteria and deploy to posdaMerge in PT/oneposda from feature/TADMIN-1527-update-simplified-phi-report-using-agreed-criteria-and-deploy-to-posda to master
* commit 'eaeba9a883ed8ec255b65786d348c410e2a86a02':
Update PHI macro to add valid value and ctp check
Add parse scripts
Add new retired tags to flag csv
ignore
Pull request #394: Feature/TADMIN-1528 develop a workflow process to sync private tag knowledge base between apollo vaMerge in PT/oneposda from feature/TADMIN-1528-develop-a-workflow-process-to-sync-private-tag-knowledge-base-between-apollo-va to master
* commit 'a7fca91b471aeb67117d8f54c2d117659e2408dd':
Add ImportPrivateElementSeen script
Add ExportPrivateTagData script, row, and Workflow entry
Make SyncAllSpreadsheetOps sync all including non matching
Pull request #393: Feature/TADMIN-1529 add additional messaging to dciodvfy based on geri s macro and deploy toMerge in PT/oneposda from feature/TADMIN-1529-add-additional-messaging-to-dciodvfy-based-on-geri-s-macro-and-deploy-to to master
* commit 'fb179763517004f1f3b7a124c8faee40d68552b2':
Add dciodvfy macro to the report, and fix "Macro processed" links
Adjust new dciodvfy macro run.sh to produce correct output
First working version of dciodvfy macro
Fix line endings
Add dicodvfy macro scr...
Pull request #392: removed ross from file pathMerge in PT/oneposda from feature/parsing-of-histopathology to master
* commit 'cb76193941bd9e18334faeeeaefdc2d67e45a23a':
removed ross from file path
Pull request #391: Feature/parsing of histopathologyMerge in PT/oneposda from feature/parsing-of-histopathology to master
* commit 'e63d077530f4c587b9f10afcade9a1886148671d':
filename crop
Debug of export mostly working, need tests with actual connections
getting metadata from openslide, temporarily printing to the inbox
progress
Edits/Mapping fix
Add dciodvfy macro to the report, and fix "Macro processed" linksThe links for "Macro processed" reports are now only present on
the three reports they need to be, and the API runs the correct
macro depending on the report name.
Add new /activities endpoint for UI operations involving ActivitiesThis adds a set of endpoints under /v1/activities that will be useful
for new and exsiting UI code. This includings being able to list
all activities, list timeline entries for an activity, list details
about a specific timeline entry, and retrieve the input and output data
for a given timeline entry / subprocess.
Introduce NewApplyMasks, a complete rewrite of ApplyMasksThis version handles orphans and referencing files, and does
almost all processing itself. It does still generate an edit skeleton
for moving the pre-masked files, as that operation needs to have an
email to link to (so this script cannot create a new timepoint in
a second activity without causing issues).
Fix bug with Public Copy Status Report URLWay back, the individual ABC would be running on a port like
6000 but the API was on 80 so the port was being forced to 80.
That's no longer an issue, and also the user might be on https
so 80 may break the link. This commit just removes the port entirely.
Pull request #389: Feature/parsing of histopathologyMerge in PT/oneposda from feature/parsing-of-histopathology to master
* commit '63999bbee2d3a15c03c2b796dd0d8d373943c3dc':
path bugfix for output bucket change
button to call the export operation
migration file cleanup
initial concept test
Michael Rutherford
Quasar Jarosz
Michael Rutherford