Update ImportInPlaceFromPublic to fix bugThis commit changes to using fetchall() to request
all the rows from the MySQL database into memory rather than
looping over the cursor directly, due to a timeout issue that
was being encountered when trying to copy a large collection.
Pull request #377: PathBulkMerge in PT/oneposda from pathBulk to master
* commit 'f6a48f4a1a73bee3211c652772be8c000164aa83':
new bulk edit options
way to remove labels,macros,metadata, from all of the files in an activity; in progress
Pull request #375: Generalized the Apply masks to apply edit/delete operations to any functionMerge in PT/oneposda from PT-1257-apply-masks-change to master
* commit 'f6b902c6d1860a34669e4a9e3e1f056722bd9f03':
Generalized the Apply masks to apply edit/delete operations to any function
Add new endpoint visualreview/:vr/nextThis will be used (likely temporarily) to select the "next" IEC
in the VR that needs to be worked on (that is flagged for masking,
and has a masking_status of 'created').
Change to use simpler method to determine volumetricThe old method was clever but causing trouble with many volumes
that have duplicated frames or were missing frames. This new simpler
method is temporary.
Increase NewTry's skip_large to 256This value controls when NewTry (the Posda parser itself) decides
to skip a value because it's too long. It was previously set
to 64 which was fairly small and was causing some issues with
long values.
Pull request #371: Seg linkage branchMerge in PT/oneposda from seg_linkage_branch to master
* commit '7405cd8d6c118a5672dd103bae7aab5ead678c8a':
printing cleanups
decreased prints
Bugfix in 500+ records report writing, and spelling/naming fixes"
Pull request #358: Pathology outputfile bugMerge in PT/oneposda from pathology_outputfile_bug to master
* commit 'f4087fc36378894a88cc507b3078141c6d80f9a9':
bugfixes
New intial tp imported from wrong branch
change to commit edits, non-edited files only copy if not on output dir. more debug info printing in patient mapping
fixed column error in export query
syntax fix
re-arranged the update mapping logic
add printline
Fi...
Make some changes necessary to support Cornerstone v2.0 NiftiCornerstone 2.0 made some major changes in how Nifti files were loaded
and processed, and one of those is that it determines if the file is
compressed by looking at the end of the url (.gz vs not). To support
proper handling of these files, this commit adds an alias to the
files/data endpoint of files/data.gz. This does nothing other than trick
the Cornerstone code into believing the file is co...
Pull request #369: Seg linkage branchMerge in PT/oneposda from seg_linkage_branch to master
* commit '902a8d47903a328afeb3d7d055d50820e5783184':
changed to count None or empty string ref image FOR as valid success
changed to use BackgroundEditTp
None to empty
attempting to get edit sheet running fully
Edit skeleton report added
added FOR check, requires the image files have a FOR
changed workflow
working linkage s...
Quasar Jarosz
Quasar Jarosz
Michael Rutherford